Microbiology
Head
Professors
- Lee-Ann Allen (Internal Medicine), Michael A. Apicella (Internal Medicine), Gail A. Bishop (Internal Medicine), John E. Butler, Steven Clegg, John T. Harty (Pathology), Bradley D. Jones, David M. Lubaroff (Urology), Linda L. McCarter, Paul B. McCray (Pediatrics), William Nauseef (Internal Medicine), Stanley Perlman (Pediatrics), Richard J. Roller, Paul Rothman (Internal Medicine), Patrick M. Schlievert, Jack T. Stapleton (Internal Medicine), George V. Stauffer, Mark F. Stinski, Jerrold P. Weiss (Internal Medicine), Mary E. Wilson (Internal Medicine)
Professors emeriti
- Robert F. Ashman (Internal Medicine), John Cazin Jr., Charles D. Cox, Michael G. Feiss, David T. Gibson, Louis G. Hoffmann, William Johnson, Erich W. Six, Donald P. Stahly, C. Martin Stoltzfus
Associate professors
- Alex Horswill, Jon Houtman, John R. Kirby, Al J. Klingelhutz (Radiation Oncology), Kevin Legge (Pathology), Wendy J. Maury, Steven M. Varga (Pathology), David S. Weiss, Timothy L. Yahr
Associate professor emeritus
Assistant professors
- Craig D. Ellermeier, Chioma M. Okeoma, Howard Xue
Lecturers
- Jennifer D. Boddicker, Marcia L. Cordts, Linda M. Knudtson
Undergraduate degree: B.S. in Microbiology Undergraduate nondegree program: Minor in Microbiology Graduate degrees: M.S., Ph.D. in Microbiology Web site: http://www.uiowa.edu/microbiology
Study in the Department of Microbiology is dedicated to the branch of biological sciences that deals with the smallest living things: bacteria, archaea, fungi, algae, protozoa, and viruses. It is coupled with immunology, the study of the response of higher organisms to foreign substances.
Microbiology and immunology are at the forefront of the modern biological revolution. Microbes are often the experimental subjects of choice for examining basic genetic and biological phenomena because of their small size, rapid growth rate, and relative simplicity. A significant portion of contemporary biochemical research employs microbiological and immunological methods.
Current research is making theoretical and practical advances concerning microbial species and viruses that infect animals, including man, plants, and other microbes; the use of comparative genomics, gene expression profiling, and recombinant DNA methods to analyze basic biological processes and generate valuable products; the nature and occurrence of microbial life in extreme or unusual environments; microbial synthesis and modification of antibiotics and other natural products; the role of microbes in stabilization of the biosphere by recycling and detoxifying waste products; the genetics and regulation of metabolic processes; and the genetics and regulation of the immune response, including characterization of mechanisms used by bacteria to signal one another and characterization of interactions between different types of immune cells and their targets.
The Department of Microbiology offers degree programs for undergraduates and for graduate students and administers the academic curriculum at both levels. The College of Liberal Arts and Sciences grants undergraduate degrees in microbiology and oversees undergraduate academic policy relating to the student record. The Graduate College grants graduate degrees in microbiology.
Back To TopUndergraduate Program
- Major in microbiology (Bachelor of Science)
- Minor in microbiology
Microbiology is an excellent major for undergraduate students who want a good general education with emphasis on an important and interesting branch of biological sciences. Graduates find employment opportunities in government, hospitals, public health laboratories, research laboratories, and industrial laboratories (food, dairy, chemical, pharmaceutical, and genetic engineering companies). Those who pursue advanced degrees have more advanced career opportunities in these same areas as well as in college and university teaching.
Back To TopBachelor of Science
The Bachelor of Science with a major in microbiology requires a minimum of 120 s.h., including 63-64 s.h. of work for the major (21 s.h. in microbiology and 42-43 s.h. in supporting course work). Students must complete at least 12 s.h. of the required 21 s.h. in microbiology courses at The University of Iowa. Students also must complete the College of Liberal Arts and Sciences General Education Program.
The major requires the following course work.
Microbiology Courses
Students earn 21 s.h. in microbiology courses, as follows.
| 061:157 General Microbiology (with a grade of C or higher) | 5 s.h. | | 061:163 Seminar: Microbiology (taken during last two semesters before graduation) | 2 s.h. | | Additional microbiology courses, with at least 12 s.h. in courses numbered 061:147 and above, excluding 061:164 and 061:220 | 14 s.h. |
Students must earn a grade of C or higher in 061:157 in order to take more advanced microbiology courses.
Students must take 061:163 once for credit during their last two semesters before graduation. They may apply a maximum of 2 s.h. earned in the course toward the major, but they are encouraged to take it for 0 s.h. during other semesters after they have completed 061:157.
A maximum of 4 s.h. earned in 061:161 Undergraduate Research in Microbiology may be counted toward the major. However, honors students must complete 23 s.h. of microbiology courses for the major and may count 6 s.h. earned in 061:171 Honors Undergraduate Research in Microbiology; see "Honors" below.
Supporting Course Work
In addition to the required 21 s.h. of microbiology, the major requires supporting course work. These courses may not be taken pass/nonpass.
One of these sequences:
One of these:
| 22M:016 Calculus for the Biological Sciences | 4 s.h. | | 22M:025 Calculus I | 4 s.h. | | 22M:031 Engineering Mathematics I: Single Variable Calculus | 4 s.h. | | 22S:101 Biostatistics | 3 s.h. | | 171:161 Introduction to Biostatistics | 3 s.h. |
In addition, the following course may be recommended for some students.
Back To TopFour-Year Graduation Plan
The following checkpoints list the minimum requirements students must complete by certain semesters in order to stay on the University's Four-Year Graduation Plan. (Courses in the major are those required to complete the major; they may be offered by departments other than the major department.)
Before the third semester begins: 002:010 Principles of Biology I; 004:011 Principles of Chemistry I, and 004:012 Principles of Chemistry II; an approved calculus or biostatistics class; and at least one-quarter of the semester hours required for graduation
Before the fifth semester begins: 002:011 Principles of Biology II; 004:121 Organic Chemistry I, 004:122 Organic Chemistry II, and 004:141 Organic Chemistry Laboratory; 061:157 General Microbiology; and at least one-half of the semester hours required for graduation
Before the seventh semester begins: five more courses in the major and at least three-quarters of the semester hours required for graduation
Before the eighth semester begins: another 10-12 s.h. of course work
During the eighth semester: enrollment in all remaining course work in the major, all remaining required General Education courses, and a sufficient number of semester hours to graduate
Back To TopHonors
Microbiology majors who are members of the University of Iowa Honors Program may enroll in the honors program in microbiology. Membership in the University Honors Program requires that students maintain a cumulative University of Iowa g.p.a. of at least 3.33. Microbiology honors students also must maintain a g.p.a. of at least 3.33 in microbiology courses. To graduate with honors in the major, students must complete 23 s.h. of course work in microbiology, including 6 s.h. in 061:171 Honors Undergraduate Research in Microbiology, which introduces them to experimental research. At the end of the research, they must successfully present written and oral reports.
Back To TopMinor
The minor in microbiology requires a minimum of 15 s.h. in microbiology courses, including 12 s.h. in advanced courses taken at The University of Iowa. For the minor, courses numbered 061:147 Survey of Immunology and above, except 061:164 Nursing Microbiology, are considered advanced. Students must maintain a g.p.a. of at least 2.00 in the minor. Course work in the minor may not be taken pass/nonpass. Students may count a maximum of 2 s.h. earned in 061:161 Undergraduate Research in Microbiology or 061:171 Honors Undergraduate Research in Microbiology, and 2 s.h. earned in 061:163 Seminar: Microbiology, toward the minor. They also may count 061:218 Microscopy for Biomedical Research, but not 061:220 Advanced Microscopy for Biomedical Research.
Back To TopGraduate Programs
- Master of Science in microbiology
- Doctor of Philosophy in microbiology
Graduate study in microbiology is designed to help students become highly qualified in microbiology research and teaching. Admitted graduate students usually pursue the Ph.D.
Graduate study is offered in six subdisciplines: pathogenic bacteriology, microbial genetics, immunology, microbial physiology, animal virology, and bioinformatics. Several areas involve interdisciplinary training both within and outside the department, so students gain broad experience during their course of study. Students also may pursue interdisciplinary Ph.D. programs in genetics, immunology, and molecular and cellular biology.
During their first year, students rotate in three laboratories of their choice and are advised by the Graduate Student Advisory Committee. At the end of March of the first year, they choose a research supervisor who chairs their advisory committee. The committee provides intellectual and research guidance for the student's training.
The Department of Microbiology cooperates with other University of Iowa departments to give students ample access to diverse course offerings, seminars, and research programs. For example, microbiology students may participate in courses and seminars in immunology, genetics, molecular and cellular biology, biocatalysis/biotechnology, and electron microscopy.
All students admitted to advanced degree programs are expected to assist in departmental teaching.
Back To TopMaster of Science
The Master of Science program in microbiology requires a minimum of 30 s.h. of graduate credit. M.S. students are required to earn a minimum of 12 s.h. in microbiology courses chosen from three of the department's six subdisciplines. They may substitute a course they have already taken (at The University of Iowa or elsewhere) for a course requirement, with the M.S. advisory committee's approval. Additional course requirements depend on students' interests and the advice of the examining committee.
Students must write a thesis based on their own research and defend it satisfactorily in an oral examination. No more than 9 s.h. of credit for thesis research may be counted toward the 30 s.h. required for the Master of Science.
Back To TopDoctor of Philosophy
The Doctor of Philosophy program in microbiology requires a minimum of 72 s.h. of graduate credit. Ph.D. students are required to earn approximately 10 s.h. of credit in graduate-level microbiology courses. They may substitute a course they have already taken (at The University of Iowa or elsewhere) for a course requirement, with the Ph.D. advisory committee's approval.
Students must pass a comprehensive examination before their fourth semester in the program and write a thesis based on their own research. The thesis must be defended satisfactorily in an oral examination.
Back To TopAdmission
Applicants must meet the admission requirements of the Graduate College; see the Manual of Rules and Regulations of the Graduate College or the Graduate College section of the Catalog. They should have a cumulative g.p.a. of at least 3.00 and must have completed courses in biology, chemistry (inorganic and organic), mathematics including calculus, and physics. Those admitted with deficiencies must complete the relevant course work during their first year of graduate study. Admission is determined through a review and formal vote by the faculty. Preference is given to students applying for the Ph.D. program.
Back To TopFacilities
The Department of Microbiology is situated on the University of Iowa health sciences campus, where it shares the Bowen Science Building with the Departments of Anatomy and Cell Biology, Biochemistry, Molecular Physiology and Biophysics, and Pharmacology. Laboratory space and modern equipment are available for teaching and research.
Back To TopCourses
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061:005 Microbes and Our World | 2 s.h. | | Bacteria, viruses, and parasites and their role in shaping human health, industry, current affairs, history. | | |
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061:015 Web-Based Microbes and Our World | 2 s.h. | | Bacteria, viruses, and other microorganisms; ways in which microbes affect our health, economy, and environment; how humans have harnessed microbial growth; how microbes have shaped human experience and continue to play key roles in modern life. | | |
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061:103 Principles of Infectious Diseases | 5 s.h. | | Principles and methods essential to study of microorganisms, their isolation and identification; microorganisms in infectious diseases; current immunology concepts. Requirements: M.D. enrollment. | | |
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061:104 Principles Infectious Diseases--Physician Assistant | 5 s.h. | | Principles and methods essential to study of microorganisms, their isolation and identification; microorganisms in infectious diseases; current immunology concepts. Requirements: Physician Assistant Program enrollment. | | |
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061:112 Pharmacy Microbiology | 4 s.h. | | Medical microbiology: bacteriology, immunology, pathogenic bacteriology, virology, mycology, parasitology. Requirements: pre-pharmacy standing. | | |
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061:113 Dental Microbiology | 3 s.h. | | Medical microbiology: bacteriology, immunology, pathogenic bacteriology, virology, mycology, parasitology. Requirements: D.D.S. enrollment. | | |
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061:147 Survey of Immunology | 3 s.h. | | Important principles and key concepts in immunology; overview of innate and adaptive immune systems and their functions at cellular and molecular levels. Prerequisites: 002:010 and 002:011. | | |
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061:157 General Microbiology | 5 s.h. | | Principles of microbial diversity, microbial genetics, physiology and metabolism, pathogenic microbiology, virology, immunology, industrial and environmental microbiology; laboratory emphasis on basic techniques. Prerequisites: 002:010. | | |
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061:159 Pathogenic Bacteriology | 5 s.h. | | Pathogenic bacteria, with emphasis on mechanisms of pathogenicity, laboratory methods for isolation, identification; laboratory emphasis on advanced methods for study of pathogenic bacteria. Requirements: grade of C or higher in 061:157. | | |
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061:160 Microbial Physiology | 3 s.h. | | Bacterial genomes, cell structure, growth, energy metabolism, biosynthesis, mechanisms of signal transduction and regulation. Requirements: grade of C or higher in 061:157. | | |
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061:161 Undergraduate Research in Microbiology | arr. | | Experimental research under faculty supervision. Prerequisites: 002:010. | | |
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061:163 Seminar: Microbiology | 2 s.h. | | Current topics in microbiology, immunology. Requirements: grade of C or higher in 061:157 and senior standing. | | |
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061:164 Nursing Microbiology | 4 s.h. | | Overview of bacteria, viruses, and eukaryotic microorganisms that cause human disease; microbial structure, growth control and reproduction; immunology in the context of host defense mechanisms. Requirements: pre-nursing student standing. Corequisites: 002:002 or 002:010 or 002:021, if not taken as a prerequisite. | | |
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061:168 Introduction to Animal Viruses | 3 s.h. | | Basic physical, chemical, and biological properties of animal viruses; association with human disease. Requirements: grade of C or higher in 061:157. | | |
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061:170 Microbial Genetics | 3 s.h. | | Genetics of bacteria, bacteriophages. Requirements: grade of C or higher in 002:128 or 061:157. | | |
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061:171 Honors Undergraduate Research in Microbiology | arr. | | Experimental research under faculty supervision. Prerequisites: 002:010. Requirements: microbiology major, junior or senior standing, 3.33 overall g.p.a, and 3.33 g.p.a. in microbiology courses. | | |
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061:175 Microbial Genetics Laboratory | 3 s.h. | | Basic principles of genetic analysis of bacteria and bacteriophage. Prerequisites: 061:170. | | |
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061:178 Animal Viruses Laboratory | 2 s.h. | | Basic techniques and approaches in animal virology, including virus detection, virus growth measurement, and virus genetics. Prerequisites: 061:157. Corequisites: 061:168. | | |
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061:179 Bacterial Diversity | 3, 5 s.h. | | Analysis of bacteria from varied habitats; emphasis on the physiological basis and molecular characteristics of diversity. Prerequisites: 061:157. | | |
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061:190 Web-Based Nursing Microbiology | 4 s.h. | | Nursing microbiology, principles of immunology; web-based instruction. Requirements: pre-nursing standing. Corequisites: 002:002 or 002:010 or 002:021, if not taken as a prerequisite. | | |
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061:201 Graduate Immunology | 3 s.h. | | Ontogeny, activation, and function of T lymphocytes and B lymphocytes; innate immune effector mechanisms; major histocompatibility complex; antigen presentation; thymocyte positive and negative selection; signaling of T lymphocytes, B lymphocytes; emphasis on experimental methods for analysis of these processes. Requirements: (for 148:201) college biology, general chemistry, and introductory immunology courses; (for 061:201) courses in college biology, genetics, general chemistry, and introductory immunology. Recommendations: (for 148:201) courses in biochemistry and genetics; (for 061:201) biochemistry course. Same as 148:201. | | |
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061:207 Advanced Topics in Immunology | 3 s.h. | | In-depth analysis of selected areas. Requirements: (for 148:221) 148:201 or 148:202; (for 061:207) 061:201 and 061:202, or 148:201 and 148:202. Same as 148:221. | | |
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061:217 Integrated Topics in Infectious Diseases | 1 s.h. | | Clinical cases used to raise questions in host-parasite interactions; case/scientific exposés followed by related journal club discussions at next class session. Same as 148:217. | | |
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061:218 Microscopy for Biomedical Research | arr. | | Preparation, analysis of biomedical projects by light and electron microscopy. Prerequisites: 002:114. Same as 060:218. | | |
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061:220 Advanced Microscopy for Biomedical Research | arr. | | Technically advanced microscopy methods for research; individualized laboratory experience with opportunity to explore application of microscopy methods. Requirements: (for 060:220) an introductory microscopy course; (for 002:220) 002:218 or 060:218 or 061:218 or 012:156 or 052:156 or 060:156; (for 061:220) an introductory EM course. Same as 002:220, 060:220. | | |
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061:221 Advanced Topics in Prokaryotic Biology Module 1 | 1-2 s.h. | | Cell division and sporulation; development of critical thinking, experimental approach and design, writing, and oral presentation skills through primary literature and course specific assignments (proposal writing, writing manuscript reviews, oral presentations, small group discussions). Requirements: graduate standing in microbiology. | | |
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061:222 Advanced Topics in Prokaryotic Biology Module 2 | 1-2 s.h. | | Subversion of innate immune response by Gram-positive and Gram-negative bacteria; development of critical thinking, experimental approach and design, writing, and oral presentation skills through exposure to primary literature and assignments (proposal writing, writing manuscript reviews, oral presentations, small group discussions). Requirements: graduate standing in microbiology. | | |
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061:223 Advanced Topics in Prokaryotic Biology Module 3 | 1-2 s.h. | | Development of critical thinking, experimental approach and design, writing, and oral presentation skills through exposure to selected topics in microbiology and assignments (proposal, writing manuscript reviews, oral presentations, small group discussions). Requirements: graduate standing in microbiology. | | |
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061:224 Advanced Topics in Prokaryotic Biology Module 4 | 1-2 s.h. | | Development of critical thinking, experimental approach and design, writing, and oral presentation skills through exposure to selected topics in microbiology and assignments (proposal, writing manuscript reviews, oral presentations, small group discussions). Requirements: graduate standing in microbiology. | | |
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061:225 Advanced Topics in Prokaryotic Biology Module 5 | 1-2 s.h. | | Development of critical thinking, experimental approach and design, writing, and oral presentation skills through exposure to selected topics in microbiology and assignments (proposal, writing manuscript reviews, oral presentations, small group discussions). Requirements: graduate standing in microbiology. | | |
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061:226 Advanced Topics in Prokaryotic Biology Module 6 | 1-2 s.h. | | Development of critical thinking, experimental approach and design, writing, and oral presentation skills through exposure to selected topics in microbiology and assignments (proposal, writing manuscript reviews, oral presentations, small group discussions). Requirements: graduate standing in microbiology. | | |
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061:227 Advanced Topics in Microbiology | 1 s.h. | | Presentations by graduate students on selected research topics in microbiology; different topics each semester. Offered fall and spring semesters. Requirements: graduate standing in microbiology. | | |
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061:247 Graduate Survey of Immunology | 3 s.h. | | Important principles and key concepts in immunology; overview of innate and adaptive immune systems and their functions at cellular and molecular levels. Same as 148:247. | | |
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061:259 Graduate Pathogenic Bacteriology | 3 s.h. | | Pathogenic bacteria, with emphasis on mechanisms of pathogenicity, laboratory methods for isolation, identification. | | |
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061:260 Graduate Microbial Physiology | 3 s.h. | | Bacterial genomes, cell structure, growth, energy metabolism, biosynthesis, mechanisms of signal transduction and regulation. | | |
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061:261 Graduate Research in Microbiology | arr. | | Requirements: microbiology graduate standing. | | |
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061:263 Graduate Student Research Seminar | 1 s.h. | | Presentation of thesis work in progress. Requirements: microbiology graduate standing. | | |
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061:264 Directed Study in Microbiology | arr. | | | |
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061:265 Topics in Virology Literature | 1 s.h. | | Papers of current interest in primary virology literature. | | |
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061:267 Graduate Introduction to Animal Viruses | 3 s.h. | | Basic physical, chemical, biological properties of animal viruses, their association with human diseases; discussion topics in the primary literature. | | |
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061:268 Biology and Pathogenesis of Viruses | 2 s.h. | | Molecular biology of animal DNA and RNA viruses, interaction of these viruses with eucaryotic cells; mechanisms of viral latency, persistence, cellular transformation, oncogenesis; virology literature. Prerequisites: 061:168 or 061:267. | | |
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061:270 Graduate Microbial Genetics | 3 s.h. | | Genetics of bacteria, bacteriophages. | | |
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061:271 Graduate Microbial Genetics Laboratory | 3 s.h. | | Basic principles of genetic analysis in bacteria. Prerequisites: 061:270. | | |
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061:275 Perspectives in Biocatalysis | 1-3 s.h. | | Applied enzymology, protein design, structure-activity relationships, biosensor technology, microbial transformations, biodegradation of environmental pollutants. Repeatable. Requirements: graduate standing in a participating department supported by the Predoctoral Training Program in Biotechnology. Same as 004:275, 046:275, 052:275, 053:275, 099:275. | | |
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061:279 Graduate Bacterial Diversity | 3, 4, 6 s.h. | | Analysis of bacteria from varied habitats; emphasis on the physiological basis and molecular characteristics of diversity. | | |
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061:299 Mechanisms of Parasitism Journal Club | 1 s.h. | | Reviews of recent publications in molecular parasitology research and thesis research by training grant or journal club students. Same as 142:299. | | |
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